Publications

  1. G. Samaan, A. Jimenez Salinas, A. Bailie, J. Grim, J. Cizmic, A. Jones, Y. K. Lee, Y. B. Purse “Single-molecule detection of oligonucleotides using the fluorescent nucleobase analogue ABN” ChemRxiv. (2024)
  2. M. Ko, H. J. Kim, J. Park, H. Lee, K. N. Lee, K. Kim, J. Lee, S. J. Yoon, Tony Kim, S. Jeong, K. Heo, Y. K. Lee, Y. Rag. Do* “Isolation of bovine milk exosome using electrophoretic oscillation assisted tangential flow filtration with antifouling of micro-ultrafiltration membrane filters” ACS Appl. Mater. Interfaces 15, 26069 (2023)
  3. A. Jimenez Salinas, Y. K. Lee “In unity, there is strength: Phase separation controls receptor tyrosine kinase signal transduction” Molecular Cell 82, 1081 (2022)
  4. M. R. Packer, J. A. Parker, J. K. Chung, Z. Li, Y. K. Lee, T. Cookis, H. Guterres, S. Alvarez, M. A. Hossain, D. P. Donnelly, J. N. Agar, L. Makowski, M. Buck, J. T. Groves, C. Mattos “Raf promotes dimerization of the Ras G-domain with increased allosteric connections” PNAS 10, 118 (2021).
  5. D. Karandur, M. Bhattacharyya, Z. Xia, Y. K. Lee, S. Muratcioglu, D. McAffee, E. D. McSpadden, B. Qiu, J. T. Groves, E. R. Williams, J. Kuriyan. “Breakage of the Oligomeric CaMKII Hub by the Regulatory Segment of the Kinase” eLife 9 (2020).
  6. M. Bhattacharyya‡, Y. K. Lee‡, S. Muratcioglu, B. Qiu, P. Nyayapati, H. Schulman, J. T. Groves, J. Kuriyan “Flexible Linkers in CAMKII Control the Balance Between Activating and Inhibitory Autophosphorylation” eLife 9 (2020). ‡=Co-first author
  7. S.D. Hansen, W. Y. C. Huang, Y. K. Lee, P. Bieling, S. M. Christensen, J. T. Groves “Stochastic Geometry Sensing and Polarization in a Lipid Kinase-Phosphatase Competitive Reaction“ PNAS 10, 116  (2019).
  8. W.Y.C. Huang, S. Alvarez, Y. Kondo, Y. K. Lee, J. K. Chung, H. Y. M. Lam, K. H. Biswas, J. Kuriyan, J. T. Groves “A molecular assembly phase transition and kinetic proofreading modulate Ras activation by SOS“ Science 363, 1098 (2019).
  9. M. Dong , D. Spelke, Y. K. Lee, J. Chung, C.-H. Yu , D. Schaffer, J.T. Groves “Spatiomechanical modulation of EphB4:ephrin-B2 signaling in neural stem cell differentiation“ Biophysical Journal 115, 865 (2018).
  10. J. Chung‡, Y. K. Lee‡, J. Denson, W. Gillette, S. Alvarez, A. Stephen, J. T. Groves “Membrane-reconstituted K-Ras4B remains monomeric over a wide range of surface densities and membrane lipid compositions“ Biophysical Journal 114, 137 (2018). ‡=Co-first author
  11. K. Kim, J.-W. Oh, Y. K. Lee, J. Son, J.-M. Nam “Associating and dissociating nanodimer analysis for quantifying ultra-small amounts of DNA” Angew. Chem. Int. Ed. 56, 9877 (2017).
  12. Y. K. Lee, S. Low-Nam, Jean K. Chung, S. D. Hansen, S. Alvrez, H. Y. M. Lam, J. T. Groves “Mechanism of SOS PR-domain Autoinhibition Revealed by Single Molecule Assay on Native Protein from Lysate“ Nature Communications 8, 15061 (2017).
        See also: December 2017 Genetic Engineering and Biotechnology News (GENengnews.com)
  13. S. Kim, J.-E. Park, W. Hwang, J. Seo, Y. K. Lee, J.-H. Hwang, J.-M. Nam “Optokinetically Encoded Nanoprobe-Based Multiplexing Strategy for MicroRNA Profiling“ J. Am. Chem. Soc. 139, 3558 (2017).
  14. J. K. Chung‡, Y. K. Lee‡, H. Y. M. Lam‡, J. T. Groves “Covalent Ras Dimerization on Membrane Surfaces through Photosensitized Oxidation“ J. Am. Chem. Soc. 138, 1800 (2016). ‡=Co-first author
  15. W. Li, J. K. Chung, Y. K. Lee, J. T. Groves “Graphene-Templated Supported Lipid Bilayer Nanochannels“ Nano Lett. 16, 5022 (2016).
  16. Y. K. Lee‡, S. Kim‡, J.-M. Nam “Dark-Field-Based Observation of Single-Nanoparticle Dynamics on a Supported Lipid Bilayer for In Situ Analysis of Interacting Molecules and Nanoparticles“ ChemPhysChem 16, 77 (2015). ‡=Co-first author
  17. Y. K. Lee, S. Kim, J. -W. Oh, J. -M. Nam “Massively Parallel and Highly Quantitative Single-Particle Analysis on Interactions between Nanoparticles on Supported Lipid Bilayer“ J. Am. Chem. Soc. 136, 4081 (2014).
        Selected as JACS spotlights: “Snapshots of Nanoparticles in Action Reveal Their Interactions“      J. Am. Chem. Soc. 136, 3321      (2014).
  18. S. D. Chandradoss, A. C. Haagsma, Y. K. Lee, J.-H. Hwang, J.-M. Nam and C. Joo “Surface Passivation for Single-Molecule Protein Studies“ J. Vis. Exp. 86, (2014).
  19. Y. K. Lee‡, H. Lee‡, J.-M. Nam “Lipid-Nanostructure Hybrids and Their Applications in Nanobiotechnology“ NPG Asia Materials 5, e48 (2013). ‡=Co-first author
  20. Y. K. Lee, J.-M. Nam “Electrofluidic Lipid Membrane Biosensor“ Small 8, 832 (2012).
  21. J. R. Oh, B. K. Park, Y. K. Lee, Y.-D. Huh, Y. R. Do “Enhancement of Photoluminescence by Photonic Crystal Scattering and Nanocrystalline Surface Scattering from Y2O3:Tb3+ Film Phosphors“ J. Electrochem Soc. 158, J316 (2011).
  22. D.-H. Kim, H. Lee, Y. K. Lee, J.-M. Nam, A. Levchenko “Biomimetic Nanopatterns as Enabling Tools for Analysis and Control of Live Cells“ Advanced Materials 22, 4551 (2010).
  23. J. R. Oh, Y. K. Lee, H. K. Park, Y. R. Do “Effects of Symmetry, Shape and Structural Parameters of Two-Dimensional SiNx Photonic Crystal on the Extracted Light from Y2O3:Eu3+ Film“ J. Appl. Phys. 105, 043103 (2009).
  24. K.-Y. Ko, Y. K. Lee, H. K. Park, Y.-C. Kim, Y. R. Do “The Variation of the Enhanced Photoluminescence Efficiency of Y2O3:Eu3+ Films with the Thickness to the Photonic Crystal Layer“ Opt. Express 16, 5689 (2008).
  25. S. K. Park, Y. K. Lee, H. T. Kwak, C. R. Park, J. Park, Y. R. Do “Periodic Growth of ZnO Nanorod Arrays on Two-Dimensional SiNx Nanohole Templates by Electrochemical Deposition“ J. Phys. Chem. C 112, 4129 (2008).
  26. K. Y. Ko, K. N. Lee, Y. K. Lee, Y. R. Do “Enhanced Light Extraction from SrGa2S4:Eu2+ Film Phosphors Coated with Various Sizes of Polystyrene Nanosphere Monolayers“ J. Phys. Chem. C 112, 7594 (2008).
  27. Y. K. Lee, J. R. Oh, Y.-D. Huh, Y. R. Do “Strong Perturbation of the Guided Light within Y2O3:Eu3+ Thin-Film Phosphors Coated with Two-Dimensional Air-Hole Photonic Crystal Arrays“ Appl. Phys. Lett. 91, 231908 (2007).
  28. Y. K. Lee, J. R. Oh, Y. R. Do “Enhanced Extraction Efficiency of Y2O3:Eu3+ Thin-Film Phosphors Coated with Hexagonally Close-Packed Polystyrene Nanosphere Monolayers“ Appl. Phys. Lett. 91, 041907 (2007).
  29. Y. K. Lee, J. Y. Cho, C. R. Park, Y.-D. Huh, Y.-C. Kim, Y. R. Do “Optical Properties of Y2O3:Eu3+ Thin-Film Phosphors Coated with 2D SiNx/Air Photonic Crystal Layers“ Electrochem. Solid State Lett. 10, H82 (2007).
  30. K.-Y. Ko, Y. K. Lee, Y.-D. Huh, Y. R. Do “Structural Effect of a Two-Dimensional SiO2 Photonic Crystal Layer on Extraction Efficiency in Sputter-Deposited Y2O3:Eu3+ Thin-Film Phosphors“ J. Appl. Phys. 102, 013509 (2007).